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Proust-Lima Cécile

Director of research in Biostatistics cecile.proust-lima@inserm.fr

Career path

  • Positions

2023-… deputy director of the BIOSTAT research team, Inserm BPH, Bordeaux, France.
2019-… Director of Research, Inserm, Bordeaux, France.
2008-2019 Researcher, Inserm, Bordeaux, France.
2008 Research Assistant, Biostatistics and Nutrition departments, Inserm, Bordeaux, France.
2008 Assistant Professor, ISPED, Université Bordeaux Segalen, Bordeaux, France.
2007 Postdoctoral fellow, Department of Biostatistics, School of Public Health, University of Michigan, Ann Arbor, USA.
2003-2006 Assistant professor, ISPED, Université Bordeaux Segalen, Bordeaux, France.

  • Education

2014 HDR (Habilitation to conduct research), Univ. Bordeaux, France.
2006 PhD in Biostatistics, Univ. Bordeaux Segalen, France.
2003 Master degree in Epidemiology and Public Health, ISPED, Univ. Bordeaux Segalen, France.
2002 Master degree in Biostatistics, National School for Statistics and Information Analysis, ENSAI, Rennes, France.

Fonctions

  • Research interests

Development of statistical methods to describe, explain and predict chronic disease progressions.

I specialized over the years in latent class and latent process models for the joint analysis of correlated longitudinal markers and event time history with applications notably in cerebral aging and neurodegenerative diseases (Alzheimer’s Disease and related dementias, Multiple System Atrophy).

Beyond the development and application of dynamic statistical models, my group also develops individual dynamic predictions to quantify the risk of experiencing a clinical event based on the dynamic history of an individual, causal inference techniques for longitudinal data, and composite methodologies combining biostatistical modelling and machine learning methods.

All the developments, made available through open-source software (e.g., R packages lcmm, DynForest), are intended to address Public Health research questions through close collaborations with epidemiologists and clinicians and the analysis of large epidemiological cohort studies.

 

  • Teaching

Joint models, Latent class mixed models, Latent variable models, (Generalized) linear mixed models, Longitudinal analysis of psychometric scales in Masters, summer schools, short courses

 

  • Editorial duties

I serve as Associate Editor for Biometrics (since 2014) and I am a former Associate Editor of Biostatistics (2016-2022).

 

  • International initiatives

I belong to the leadership committee of the MELODEM initiative (Methods in Longitudinal Research in Dementia). http://melodem.org/

I am part of the STRATOS initiative (STRengthening Analytical Thinking for Observational Studies), topic group Measurement Error and Misclassification since 2022. https://stratos-initiative.org/

 

  • Scientific Societies

I am a member of the Representative Council of the International Biometric Society (IBS) and of the Council of the French Biometric Society (SFB).

Publications

  • Papers

See on WOS: https://www.webofscience.com/wos/author/record/1208723

or ORCID: https://orcid.org/0000-0002-9884-955X

For pre-prints, see Arxiv page: http://arxiv.org/a/proustlima_c_1

  • Software

lcmm: Extended Mixed Models Using Latent Classes and Latent Processes. R  package: https://cecileproust-lima.github.io/lcmm/

DynForest: Random Forest with Multivariate Longitudinal Predictors. R package https://github.com/anthonydevaux/DynForest

hdlandmark: landmark approach for dynamic prediction of time-to-events from large dimensional longitudinal biomarker history. R package; https://github.com/anthonydevaux/hdlandmark

marqLevAlg: A Parallelized Algorithm for Least-Squares Curve Fitting. R package; https://github.com/VivianePhilipps/marqLevAlgParallel

JLPM: Joint models based on Latent Processes. R package; https://github.com/VivianePhilipps/JLPM

CInNPL: Causal Inference in a Network of Latent Processes. R package; https://github.com/bachirtadde/CInLPN

NormPsy: Normalisation of  Psychometric Tests. R package

See my github repository at https://github.com/CecileProust-Lima

Autre publications

BPH Université de Bordeaux L'inserm